Scientists “Escape the Confines of the Natural World” to Dissect the Complex Choices of Animals

Shell-Dwelling Fish Neolamprologus multifasciatus

This is the study species Neolamprologus multifasciatus, a shell-dwelling cichlid from Lake Tanganyika, Africa. Credit: The Jordan Lab, Jakob Gübel

What is important when you choose a home? Space, security, light — or a combination of these? Like humans, animals make choices about where to live that have important implications for their livelihoods. But unlike humans, animals do not easily reveal the basis of their choice.

Now, researchers from the Max Planck Institute of Animal Behavior in Konstanz and the University of Konstanz have created a paradigm that can disentangle the strands of animal decision-making. By using CT scanning, 3D modelling, and 3D printing, they have created artificial shelters that vary in precise ways, and used these structures to reveal the underlying preferences of animals.

The findings are reported in Proceedings of the Royal Society B in a paper by Humboldt post-doctoral fellow, Dr. Aneesh Bose; bachelor students of the University of Konstanz, Johannes Windorfer and Alex Boehm; and Dr. Alex Jordan, Principal Investigator in the Max Planck Institute of Animal Behavior and the DFG Cluster of Excellence “Centre for the Advanced Study of Collective Behaviour” at the University of Konstanz. The study also included co-authors from the University of Basel.

Studying shelter selection

Aneesh Bose, a postdoc in Jordan’s lab and co-first author of the study points out that the choices an animal makes, especially when it comes to choosing a home, can have major implications for the choosing animal. “A shelter can serve many ecological roles, a place to rear babies, hide from predators, perform social behavior,” says Bose. “But just looking at the choices animals make doesn’t give us a correct answer of what they want because they are constrained by what’s available to them.”

3D Printed Shell With Real Shell

Shells of snails were first CT scanned then 3D printed to create artificial shelters that vary in highly precise ways. 3D printed shell (left) and real shell (right). Credit: The Jordan Lab, Max Planck Institute of Animal Behavior

The problem with studying shelter selection in the wild is that many traits in nature are linked. A bigger shelter (for example a burrow, den, hole, or shell), could be better for rearing off-spring, while a bigger shelter entrance opens the way for more predators to enter. However, bigger shelters often have bigger entranceways, and many animals are unable to physically alter the structures they encounter and choose amongst in the wild. Therefore, pinpointing the function behind an animal’s preferences for shelter structures requires circumventing the constraints of the natural world where traits are often correlated.

3D models of shells

The researchers devised an experimental framework that enabled methodical appraisal of the possible traits of importance. Selecting a species of shell-dwelling cichlid fish (Neolamprologus multifasciatus) from Lake Tanganyika, Africa, they used high resolution CT scanning on a range of the snail shells that the fish use as shelters. From the scans, 3D models of the structures were created wherein certain features of the shells were manipulated independently of each other. The models were 3D printed to create accurate shell replicas and then offered to fish in choice experiments.


Real shells were CT scanned to create highly precise models of real structures in nature.

Fish showed preferences for exaggerated shells that bore dimensions that do not exist, or rarely exist, in nature. Fish preferred shells that were fully intact and either enlarged, lengthened, or had widened apertures. Notably, fish were able to distinguish chirality — the direction of coiling — in the shells provided, always favoring shells with the same chirality as those that exist in their natural habitat. The important finding was that, for fish, not every home structural feature is equal. In fact, they preferred shell intactness more than shell length, which was itself preferred more heavily than entrance size. These are facets of the fish’s decision-making process that could not be ascertained without such a controlled, manipulative experiment.

Understanding animal behavior

“The innovation of our study is that we have been able to 3D print a biological structure with precisely controlled dimensions, rather than using samples of real shells, which are limited in how they can be manipulated,” says Windorfer, a bachelor student and co-lead author on the study. “And that way we escape the confines of the natural world.”

Jordan, senior author on the study says: “Our ultimate goal is to understand why animals choose the things they do, so first we have be certain we know what they choose. For example, I choose my beer based on taste, and I don’t really care about the bottle it comes in. But someone watching me might notice that all my favorite beers come in green bottles, and conclude I prefer green bottles.”

“If we are to avoid making the same mistake in animal behavior, we need to figure out a different way. Our study shows how you can experimentally dissociate linked traits and gives us a very powerful experimental framework to explore the ultimate basis of animal decision-making.”

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Reference: “Structural manipulations of a shelter resource reveal underlying preference functions in a shell-dwelling cichlid fish” by Aneesh P. H. Bose, Johannes Windorfer, Alex Böhm, Fabrizia Ronco, Adrian Indermaur, Walter Salzburger and Alex Jordan, 20 May 2020, Proceedings of the Royal Society B.
DOI: 10.1098/rspb.2020.0127

Biologists from the University of Konstanz and Max Planck Institute of Animal Behavior in Konstanz develop a paradigm using CT-scanning, 3D-modelling and 3D-printing to examine how animals choose between complex alternatives.

A shell-dwelling cichlid fish (Neolamprologus multifasciatus) from Lake Tanganyika, Africa, were given artificial shells to choose from in experiments.

Authors include Humboldt post-doctoral fellow, Dr. Aneesh Bose; bachelor students of the University of Konstanz, Johannes Windorfer and Alex Boehm; and Dr Alex Jordan, Principal Investigator in the Max Planck Institute of Animal Behavior and the DFG Cluster of Excellence “Centre for the Advanced Study of Collective Behaviour” at the University of Konstanz. The study also included co-authors from the University of Basel.

Alex Jordan and Aneesh Bose are part of the University of Konstanz’s Cluster of Excellence “Centre for the Advanced Study of Collective Behaviour”, which has been funded in the Excellence Strategy of the German Federal and State Governments since 2019.

The research was supported by the Alexander von Humboldt Foundation, the German Research Foundation (DFG, Deutsche Forschungsgemeinschaft) under Germany’s Excellence Strategy — EXC 2117 — and the Swiss National Science Foundation.

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