BCT |
Bayesian Context Trees (BCT) algorithm |

compute_counts |
Compute empirical frequencies of all contexts |

CTW |
Context Tree Weighting (CTW) algorithm |

draw_models |
Plot the results of the BCT and kBCT functions |

generate_data |
Sequence generator |

gene_s |
SARS-CoV-2 gene S |

kBCT |
k-Bayesian Context Trees (kBCT) algorithm |

log_loss |
Calculating the log-loss incurred in prediction |

MAP_parameters |
Parameters of the MAP model |

ML |
Maximum Likelihood |

pewee |
Pewee birdsong |

prediction |
Prediction |

sars_cov_2 |
SARS-CoV-2 genome |

show_tree |
Plot tree with given contexts |

SP500 |
Daily changes in the S&P 500 index |

zero_one_loss |
Calculating the 0-1 loss incurred in prediction |